Development of a SERS based cancer diagnosis approach employing cryosectioned thyroid tissue samples on PDMS

dc.authorid mert, sevda/0000-0002-0481-2829
dc.authorscopusid 56592645900
dc.authorscopusid 35190979600
dc.authorscopusid 57207541140
dc.authorscopusid 57221544109
dc.authorscopusid 12797664300
dc.authorscopusid 6701474288
dc.authorscopusid 6701474288
dc.contributor.author Mert, Sevda
dc.contributor.author Sancak, Seda
dc.contributor.author Aydin, Hasan
dc.contributor.author Fersahoglu, Ayse Tuba
dc.contributor.author Somay, Adnan
dc.contributor.author Ozkan, Ferda
dc.contributor.author Culha, Mustafa
dc.date.accessioned 2024-05-25T11:25:23Z
dc.date.available 2024-05-25T11:25:23Z
dc.date.issued 2022
dc.department Okan University en_US
dc.department-temp [Mert, Sevda] Yeditepe Univ, Fac Engn, Dept Genet & Bioengn, TR-34755 Istanbul, Turkey; [Mert, Sevda] Istanbul Okan Univ, Fac Engn, Dept Genet & Bioengn, TR-34959 Istanbul, Turkey; [Sancak, Seda] Univ Hlth Sci, Faith Sultan Mehmet Educ & Res Hosp, Dept Internal Med Endocrinol & Metab Disorders, TR-34752 Istanbul, Turkey; [Aydin, Hasan] Yeditepe Univ Hosp, Dept Internal Med, Sect Endocrinol & Metab, TR-34752 Istanbul, Turkey; [Fersahoglu, Ayse Tuba] Univ Hlth Sci, Fatih Sultan Melunet Educ & Res Hosp, Gen Surg Clin, TR-34752 Istanbul, Turkey; [Somay, Adnan] Univ Hlth Sci, Fatih Sultan Mehmet Educ & Res Hosp, Dept Pathol, TR-34752 Istanbul, Turkey; [Ozkan, Ferda] Yeditepe Univ Hosp, Dept Pathol, TR-34752 Istanbul, Turkey; [Culha, Mustafa] Oregon Hlth & Sci Univ, Canc Early Detect Adv Res Ctr CEDAR, Knight Canc Inst, Portland, OR 97239 USA; [Culha, Mustafa] Sabanci Univ, Nanotechnol Res & Applicat Ctr SUNUM, TR-34956 Istanbul, Turkey; [Culha, Mustafa] Augusta Univ, Dept Chem & Phys, Augusta, GA 30912 USA en_US
dc.description mert, sevda/0000-0002-0481-2829 en_US
dc.description.abstract An efficient SERS based novel analytical approach named Cryosectioned-PDMS was developed systematically and evaluated applying on 64 thyroid biopsy samples. To utilize thyroid biopsy samples, a 20-mu l volume of h-AgNPs suspension was dropped on a 5-mu m thick cryosectioned biopsy specimen placed on the PDMS coated glass slide. The SERS spectra from a 10 x 10 points array acquired by mapping 22.5 mu m x 22.5 mu m sized area from suspended dried droplets placed on the tissue surface. The probability of correctly predicted performance for diagnosis of malignant, benign and healthy tissues was resulted in the accuracy of 100 % for the spectral bands at 667, 724, 920, 960, 1052, 1096, 1315 and 1457 cm(-1) using PCA-fed LDA machine learning. The Cryosectioned-PDMS biophotonic approach with PCA-LDA predictive model demonstrated that the vibrational signatures can accurately recognize the fingerprint of cancer pathology from a healthy one with a simple and fast sample preparation methodology. (C) 2022 Elsevier Inc. All rights reserved. en_US
dc.identifier.citationcount 9
dc.identifier.doi 10.1016/j.nano.2022.102577
dc.identifier.issn 1549-9634
dc.identifier.issn 1549-9642
dc.identifier.pmid 35716872
dc.identifier.scopus 2-s2.0-85132835581
dc.identifier.scopusquality Q1
dc.identifier.uri https://doi.org/10.1016/j.nano.2022.102577
dc.identifier.uri https://hdl.handle.net/20.500.14517/895
dc.identifier.volume 44 en_US
dc.identifier.wos WOS:000829546200003
dc.identifier.wosquality Q2
dc.language.iso en
dc.publisher Elsevier en_US
dc.relation.publicationcategory Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı en_US
dc.rights info:eu-repo/semantics/closedAccess en_US
dc.scopus.citedbyCount 15
dc.subject Surface-enhanced Raman scattering biosensor en_US
dc.subject Cancer diagnosis en_US
dc.subject Cryosectioned-polydimethylsiloxane approach en_US
dc.subject Principle component analysis en_US
dc.subject Linear discriminant analysis en_US
dc.title Development of a SERS based cancer diagnosis approach employing cryosectioned thyroid tissue samples on PDMS en_US
dc.type Article en_US
dc.wos.citedbyCount 12

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