Development of a SERS based cancer diagnosis approach employing cryosectioned thyroid tissue samples on PDMS
dc.authorid | mert, sevda/0000-0002-0481-2829 | |
dc.authorscopusid | 56592645900 | |
dc.authorscopusid | 35190979600 | |
dc.authorscopusid | 57207541140 | |
dc.authorscopusid | 57221544109 | |
dc.authorscopusid | 12797664300 | |
dc.authorscopusid | 6701474288 | |
dc.authorscopusid | 6701474288 | |
dc.contributor.author | Mert, Sevda | |
dc.contributor.author | Sancak, Seda | |
dc.contributor.author | Aydin, Hasan | |
dc.contributor.author | Fersahoglu, Ayse Tuba | |
dc.contributor.author | Somay, Adnan | |
dc.contributor.author | Ozkan, Ferda | |
dc.contributor.author | Culha, Mustafa | |
dc.contributor.other | Genetik ve Biyomühendislik / Genetic and Bio-Engineering | |
dc.date.accessioned | 2024-05-25T11:25:23Z | |
dc.date.available | 2024-05-25T11:25:23Z | |
dc.date.issued | 2022 | |
dc.department | Okan University | en_US |
dc.department-temp | [Mert, Sevda] Yeditepe Univ, Fac Engn, Dept Genet & Bioengn, TR-34755 Istanbul, Turkey; [Mert, Sevda] Istanbul Okan Univ, Fac Engn, Dept Genet & Bioengn, TR-34959 Istanbul, Turkey; [Sancak, Seda] Univ Hlth Sci, Faith Sultan Mehmet Educ & Res Hosp, Dept Internal Med Endocrinol & Metab Disorders, TR-34752 Istanbul, Turkey; [Aydin, Hasan] Yeditepe Univ Hosp, Dept Internal Med, Sect Endocrinol & Metab, TR-34752 Istanbul, Turkey; [Fersahoglu, Ayse Tuba] Univ Hlth Sci, Fatih Sultan Melunet Educ & Res Hosp, Gen Surg Clin, TR-34752 Istanbul, Turkey; [Somay, Adnan] Univ Hlth Sci, Fatih Sultan Mehmet Educ & Res Hosp, Dept Pathol, TR-34752 Istanbul, Turkey; [Ozkan, Ferda] Yeditepe Univ Hosp, Dept Pathol, TR-34752 Istanbul, Turkey; [Culha, Mustafa] Oregon Hlth & Sci Univ, Canc Early Detect Adv Res Ctr CEDAR, Knight Canc Inst, Portland, OR 97239 USA; [Culha, Mustafa] Sabanci Univ, Nanotechnol Res & Applicat Ctr SUNUM, TR-34956 Istanbul, Turkey; [Culha, Mustafa] Augusta Univ, Dept Chem & Phys, Augusta, GA 30912 USA | en_US |
dc.description | mert, sevda/0000-0002-0481-2829 | en_US |
dc.description.abstract | An efficient SERS based novel analytical approach named Cryosectioned-PDMS was developed systematically and evaluated applying on 64 thyroid biopsy samples. To utilize thyroid biopsy samples, a 20-mu l volume of h-AgNPs suspension was dropped on a 5-mu m thick cryosectioned biopsy specimen placed on the PDMS coated glass slide. The SERS spectra from a 10 x 10 points array acquired by mapping 22.5 mu m x 22.5 mu m sized area from suspended dried droplets placed on the tissue surface. The probability of correctly predicted performance for diagnosis of malignant, benign and healthy tissues was resulted in the accuracy of 100 % for the spectral bands at 667, 724, 920, 960, 1052, 1096, 1315 and 1457 cm(-1) using PCA-fed LDA machine learning. The Cryosectioned-PDMS biophotonic approach with PCA-LDA predictive model demonstrated that the vibrational signatures can accurately recognize the fingerprint of cancer pathology from a healthy one with a simple and fast sample preparation methodology. (C) 2022 Elsevier Inc. All rights reserved. | en_US |
dc.identifier.citation | 9 | |
dc.identifier.doi | 10.1016/j.nano.2022.102577 | |
dc.identifier.issn | 1549-9634 | |
dc.identifier.issn | 1549-9642 | |
dc.identifier.pmid | 35716872 | |
dc.identifier.scopus | 2-s2.0-85132835581 | |
dc.identifier.scopusquality | Q1 | |
dc.identifier.uri | https://doi.org/10.1016/j.nano.2022.102577 | |
dc.identifier.uri | https://hdl.handle.net/20.500.14517/895 | |
dc.identifier.volume | 44 | en_US |
dc.identifier.wos | WOS:000829546200003 | |
dc.identifier.wosquality | Q2 | |
dc.institutionauthor | Mert, Sevda | |
dc.language.iso | en | |
dc.publisher | Elsevier | en_US |
dc.relation.publicationcategory | Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı | en_US |
dc.rights | info:eu-repo/semantics/closedAccess | en_US |
dc.subject | Surface-enhanced Raman scattering biosensor | en_US |
dc.subject | Cancer diagnosis | en_US |
dc.subject | Cryosectioned-polydimethylsiloxane approach | en_US |
dc.subject | Principle component analysis | en_US |
dc.subject | Linear discriminant analysis | en_US |
dc.title | Development of a SERS based cancer diagnosis approach employing cryosectioned thyroid tissue samples on PDMS | en_US |
dc.type | Article | en_US |
dspace.entity.type | Publication | |
relation.isAuthorOfPublication | 8029f7b7-87d8-4323-aded-80dea355ad32 | |
relation.isAuthorOfPublication.latestForDiscovery | 8029f7b7-87d8-4323-aded-80dea355ad32 | |
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